5424 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5424 chr_5 hypothetical protein 1173009 1173992 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7453168 Thaps5424.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0417

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0217
 0.33

Most Highly Correlated Transcripts

bd1806

(bd1806) AAT_I superfamily
0.9412

22731

hypothetical protein
0.8944

11841

hypothetical protein
0.8798

21623

hypothetical protein
0.8757

10740

hypothetical protein
0.8629

20827

hypothetical protein
0.8536

8521

PseudoU_synth superfamily
0.8528

269238

(Tp_HSF_1.3e) HSF_DNA-bind superfamily
0.8483

bd524

(bd524) NA
0.8458

269274

(NRT2) 2A0108
0.8436

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34413 Not available 223935 188124 211403 Cre06.g264500.t1.2 AT3G56510.2 284998

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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