5476 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5476 chr_5 Mito_carr 1317293 1318671 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7450091 Thaps5476.2, Thaps5476.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0303

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0209
 0.34

Most Highly Correlated Transcripts

bd1885

(bd1885) NA
0.787

3981

hypothetical protein
0.7784

6517

TLD superfamily
0.7496

bd953

(bd953) NA
0.7479

bd955

(bd955) NA
0.7479

3943

4HBT
0.7458

bd842

(bd842) NA
0.7376

11234

hypothetical protein
0.7159

3765

hypothetical protein
0.7152

10096

hypothetical protein
0.7126

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 61.1111 8.94E-12 230 - 322 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 61.1111 8.94E-12 230 - 322 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 61.1111 8.94E-12 230 - 322 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 61.1111 8.94E-12 230 - 322 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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