3943 4HBTThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3943	chr_3	4HBT	2200971	2201631	-	4HBT

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452117	Thaps3943.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0314

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0031	0.36	0.00007 15000

Most Highly Correlated Transcripts

7789 Isoamyl_acetate_hydrolase_like 0.8122	1907 hypothetical protein 0.805	9636 hypothetical protein 0.7931	12899 AAA 0.7902	11234 hypothetical protein 0.7754	7794 UPF0054 0.7691
3981 hypothetical protein 0.7641	264293 DegQ 0.7526	261040 RsuA 0.7509	5476 Mito_carr 0.7458

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
4HBT		4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate...	cl00509	67.2461	9.82E-15	52 - 155	specific	238329
hot_dog superfamily		The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier...	-	67.2461	9.82E-15	52 - 155	superfamily	260469

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_33198	PHATR_33198	152715	327036	Not available	Not available	Not available	492275

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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