5573 HP_PGM_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5573 chr_5 HP_PGM_like 1546355 1547209 + HP_PGM_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7445169 Thaps5573.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0172

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0181
 0.40

Most Highly Correlated Transcripts

4292

hypothetical protein
0.9081

261744

PTZ00088
0.8938

16295

FBPase
0.8925

11183

hypothetical protein
0.8898

11462

hypothetical protein
0.8889

31829

CBS_like
0.888

36037

Trypsin_2
0.8832

8333

hypothetical protein
0.8818

261400

NA
0.8764

15464

PCI
0.8709

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly... cl11399 77.7476 6.99E-18 30 - 265 specific 132718
HP superfamily Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases;... - 77.7476 6.99E-18 30 - 265 superfamily 264352

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 226160 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003824 GO:0008152 GO:0004619 GO:0046537 GO:0046538 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0004619

phosphoglycerate mutase activity

Details: 
Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate.
GO Category: 
MF

GO:0046537

2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity

Details: 
Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D glycerate; this reaction does not require the cofactor 2,3-bisphosphoglycerate.
GO Category: 
MF

GO:0046538

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity

Details: 
Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate; this reaction requires the cofactor 2,3-bisphosphoglycerate.
GO Category: 
MF

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