5647 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5647 chr_5 hypothetical protein 1729577 1732921 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7445207 Thaps5647.5, Thaps5647.4, Thaps5647.1, Thaps5647.3, Thaps5647.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0427

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0209
 0.34

Most Highly Correlated Transcripts

1768

hypothetical protein
0.7832

2535

hypothetical protein
0.7808

4320

hypothetical protein
0.7756

25417

hypothetical protein
0.7594

9008

hypothetical protein
0.7575

3795

HA
0.7542

22379

hypothetical protein
0.7525

268194

(Tp_Myb4R1b) SANT
0.7448

262616

(MYB22)
0.7393

6935

(Tp_HSF_1.3h) HSF_DNA-bind superfamily
0.7381

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 187831 Not available 197387 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 GO:0005509 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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