5763 ERCC4
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5763 chr_5 ERCC4 2014903 2019259 + ERCC4

Synonyms

NCBI ID Ensembl Genomes exon ID
7442282 Thaps5763.1, Thaps5763.2, Thaps5763.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0376

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

4047

hypothetical protein
0.9118

23754

hypothetical protein
0.9114

bd1808

(bd1808) NA
0.9035

3934

COG2319
0.8961

4050

hypothetical protein
0.8951

263599

COG3899
0.8943

6357

hypothetical protein
0.8937

22071

Ion_trans
0.892

263610

COG3899
0.8915

20884

hypothetical protein
0.8896

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ERCC4 ERCC4 domain; This domain is a family of nucleases. The family includes EME1 which is an essential... cl10594 66.6624 1.44E-12 873 - 1023 specific 251501
ERCC4 superfamily ERCC4 domain; This domain is a family of nucleases. The family includes EME1 which is an essential... - 66.6624 1.44E-12 873 - 1023 superfamily 264010

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 244760 217458 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0004339 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0004339

glucan 1,4-alpha-glucosidase activity

Details: 
Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.
GO Category: 
MF

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