6112 TLD superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6112	chr_6	TLD superfamily	723938	729424	-	TLD superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443595	Thaps6112.4, Thaps6112.1, Thaps6112.2, Thaps6112.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0162

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0017	0.42

Most Highly Correlated Transcripts

10753 hypothetical protein 0.847	34590 nt_trans superfamily 0.841	12836 EEP superfamily 0.7995	9649 hypothetical protein 0.7904	8130 hypothetical protein 0.7877	38258 ATM1 0.7861
9240 hypothetical protein 0.7837	31075 PDEase_I 0.772	260936 HCO3_cotransp superfamily 0.7604	262619 Spc97_Spc98 0.7593

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TLD superfamily		TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&...	-	91.2287	1.88E-20	378 - 543	superfamily	261195

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45734	PHATRDRAFT_45734	Not available	317380	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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