6341 CEP19Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6341	chr_6	CEP19	1336933	1337655	+	CEP19

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453277	Thaps6341.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0222

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0266	0.39	0.00002 600000

Most Highly Correlated Transcripts

36650 hypothetical protein 0.8553	bd1891 (bd1891) COG3899 0.8395	bd1803 (bd1803) NA 0.8283	20752 hypothetical protein 0.8226	bd1749 (bd1749) NA 0.8071	260838 Trichoplein 0.8023
17310 HP_PGM_like 0.7993	bd616 (bd616) NA 0.7965	4712 Enkurin 0.7939	bd1948 (bd1948) NA 0.7918

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CEP19 superfamily		CEP19-like protein; This family includes the centrosomal protein of 19 kDa found in eukaryotes. In...	-	149.812	4.75E-45	68 - 240	superfamily	259070
CEP19 superfamily		CEP19-like protein; This family includes the centrosomal protein of 19 kDa found in eukaryotes. In...	-	149.812	4.75E-45	68 - 240	superfamily	259070

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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