260838 TrichopleinThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
260838	chr_1	Trichoplein	879264	880872	-	Trichoplein

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445281	Thaps260838.1, Thaps260838.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0305

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0266	0.39	0.00002 600000

Most Highly Correlated Transcripts

7378 leucine-rich repeat protein 0.8208	6341 CEP19 0.8023	22385 SAC3_GANP 0.7931	20752 hypothetical protein 0.7834	3228 hypothetical protein 0.7746	11965 hypothetical protein 0.7743
263046 HA 0.7716	261601 PA14 0.7705	22442 CHD 0.7695	2605 hypothetical protein 0.7627

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trichoplein		tumor suppressor, Mitostatin; Trichoplein or mitostatin, was first defined as a meiosis-specific...	-	183.575	1.05E-52	155 - 503	multi-dom	258135

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre17.g737100.t1.2	Not available	354764

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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