6897 RhaT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6897 chr_7 RhaT 766589 768262 + RhaT

Synonyms

NCBI ID Ensembl Genomes exon ID
7449211 Thaps6897.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

9987

hypothetical protein
0.9269

bd687

(bd687) NA
0.9112

5342

hypothetical protein
0.9105

9166

hypothetical protein
0.904

bd518

(bd518) p450 superfamily
0.8976

2581

hypothetical protein
0.895

1000

hypothetical protein
0.889

21257

hypothetical protein
0.8801

6056

GCD2
0.88

3071

NA
0.8772

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and... - 81.4513 2.46E-17 307 - 543 multi-dom 223769

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48145 PHATRDRAFT_48145 190712 285610 236151 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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