7076 GAT_1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7076 chr_7 GAT_1 superfamily 1202120 1203887 - GAT_1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450652 Thaps7076.1, Thaps7076.2, Thaps7076.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0248

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0002
 0.43

Most Highly Correlated Transcripts

22918

hypothetical protein
0.8187

bd740

(bd740) NA
0.7902

21554

hypothetical protein
0.7798

25518

hypothetical protein
0.7648

24201

hypothetical protein
0.7616

12899

AAA
0.7615

268601

(Tp_CCCH25) regulator [Rayko]
0.7594

9514

hypothetical protein
0.7591

268194

(Tp_Myb4R1b) SANT
0.7568

3020

hypothetical protein
0.7567

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GAT_1 superfamily Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1... - 109.29 1.38E-27 143 - 398 superfamily 260141

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 182301 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008236 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008236

serine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

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