7092 DOMON_DOHThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7092	chr_7	DOMON_DOH	1242708	1245602	+	DOMON_DOH

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447101	Thaps7092.1, Thaps7092.3, Thaps7092.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0277	0.16	1.3 64000

Most Highly Correlated Transcripts

bd1983 (bd1983) RecA-like_NTPases superfamily 0.9834	bd439 (bd439) POLBc_alpha 0.975	1393 (CAP1) Smc 0.9726	bd950 (bd950) NA 0.9699	7586 MAP65_ASE1 0.9694	bd1214 (bd1214) KISc_C_terminal 0.9693
bd1173 (bd1173) S_TKc 0.9679	7100 Condensin2nSMC 0.9677	10832 hypothetical protein 0.9644	4607 hypothetical protein 0.9607

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DOMON_DOH		DOMON-like domain of copper-dependent monooxygenases and related proteins; This diverse family...	cl14783	67.5276	4.36E-13	333 - 477	specific	187689
DOMON_like superfamily		Domon-like ligand-binding domains; DOMON-like domains can be found in all three kindgoms of life...	-	67.5276	4.36E-13	333 - 477	superfamily	265451

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004500 GO:0006584 -

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