7458 Asp_Arg_Hydrox superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7458 chr_8 Asp_Arg_Hydrox superfamily 282096 283490 - Asp_Arg_Hydrox superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443478 Thaps7458.1, Thaps7458.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0021

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0092
 0.42

Most Highly Correlated Transcripts

9168

HP_HAP_like
0.8962

41655

Chloroa_b-bind
0.8872

16295

FBPase
0.8857

38964

Chorismate_synthase
0.8686

261400

NA
0.8646

30701

PRK05279
0.8639

264556

FBPase
0.8625

36774

PanC
0.8599

37118

FeThRed_B
0.8578

13393

PLN02321
0.8572

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Asp_Arg_Hydrox superfamily Aspartyl/Asparaginyl beta-hydroxylase; Iron (II)/2-oxoglutarate (2-OG)-dependent oxygenases... - 75.9141 2.65E-16 291 - 417 superfamily 266860

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44132 PHATR_44132 228365 320968 236165 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004597 GO:0018193 GO:0030176 -

GO:0004597

peptide-aspartate beta-dioxygenase activity

Details: 
Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2.
GO Category: 
MF

GO:0018193

peptidyl-amino acid modification

Details: 
The alteration of an amino acid residue in a peptide.
GO Category: 
BP

GO:0030176

integral component of endoplasmic reticulum membrane

Details: 
The component of the endoplasmic reticulum membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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