750 Sec1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
750 chr_14 Sec1 319588 321448 - Sec1

Synonyms

NCBI ID Ensembl Genomes exon ID
7450860 Thaps750.2, Thaps750.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0436

Most Highly Correlated Transcripts

33348

IGPD superfamily
0.9322

36007

Aldolase_II superfamily
0.9224

11848

hypothetical protein
0.9138

37642

nascent-polypeptide-associated complex alpha polypeptide-like protein
0.9112

13794

WD40
0.9112

35136

NA
0.9085

29469

hypothetical protein
0.9082

22596

PLN02296
0.9072

6727

Isy1
0.9051

36419

RabGAP-TBC
0.903

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec1 Sec1 family; Sec1 family. cl15415 449.775 3.40E-151 32 - 597 specific 250279
Sec1 superfamily Sec1 family; Sec1 family. - 449.775 3.40E-151 32 - 597 superfamily 265693

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36720 PHATRDRAFT_36720 214026 208516 69761 Cre07.g333950.t1.2 AT1G77140.1 338211

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

GO:0006904 GO:0016192 -

GO:0006904

vesicle docking involved in exocytosis

Details: 
The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.
GO Category: 
BP

GO:0016192

vesicle-mediated transport

Details: 
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO Category: 
BP

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