7699 COG2391
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7699 chr_8 COG2391 908133 909497 + COG2391

Synonyms

NCBI ID Ensembl Genomes exon ID
7452858 Thaps7699.1, Thaps7699.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0282

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0087
 0.32

Most Highly Correlated Transcripts

270222

0.801

bd1766

(bd1766) NA
0.7957

bd672

(bd672) NA
0.7649

bd1150

(bd1150) PLN02433
0.7429

bd1765

(bd1765) NA
0.7415

12899

AAA
0.7343

bd176

(bd176) PP2Cc
0.7282

bd727

(bd727) NA
0.7248

2663

PLDc_Tdp1_2
0.7221

bd1620

(bd1620) ThiG
0.6985

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF4341 superfamily Domain of unknown function (DUF4341); This domain family is found in bacteria, archaea and... - 60.1837 8.86E-12 8 - 73 superfamily 258431
DUF4341 superfamily Domain of unknown function (DUF4341); This domain family is found in bacteria, archaea and... - 60.1837 8.86E-12 8 - 73 superfamily 258431
COG2391 Predicted transporter component [General function prediction only] - 68.6284 9.72E-14 1 - 150 multi-dom 225264

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43350 PHATRDRAFT_43350 Not available Not available Not available Cre10.g458100.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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