7956 Cupin_3
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7956 chr_9 Cupin_3 359718 360747 - Cupin_3

Synonyms

NCBI ID Ensembl Genomes exon ID
7449304 Thaps7956.2, Thaps7956.1, Thaps7956.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0051
 0.39

Most Highly Correlated Transcripts

10881

hypothetical protein
0.8475

4710

KefB
0.8464

bd392

(bd392) DEXDc
0.8391

20663

UbiH
0.831

7955

hypothetical protein
0.8297

20618

hypothetical protein
0.8265

8414

NA
0.8228

24413

LCAT
0.8193

bd1133

(bd1133) ATM1
0.8174

12729

PLN02205
0.8083

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cupin_3 Protein of unknown function (DUF861); This family consists of several proteins which seem to be... cl17594 58.8208 1.24E-11 209 - 273 specific 147835
Cupin_3 superfamily Protein of unknown function (DUF861); This family consists of several proteins which seem to be... - 58.8208 1.24E-11 209 - 273 superfamily 266754
Cupin_3 Protein of unknown function (DUF861); This family consists of several proteins which seem to be... cl17594 58.8208 1.24E-11 209 - 273 specific 147835
Cupin_3 superfamily Protein of unknown function (DUF861); This family consists of several proteins which seem to be... - 58.8208 1.24E-11 209 - 273 superfamily 266754

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 197491 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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