8006 Asp_Arg_Hydrox superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8006 chr_9 Asp_Arg_Hydrox superfamily 490017 491607 - Asp_Arg_Hydrox superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443538 Thaps8006.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0248

Most Highly Correlated Transcripts

4757

Leo1
0.917

40200

TRX_reduct
0.9159

268443

SAICAR_synt_Sc
0.9149

8376

hypothetical protein
0.9121

2540

hypothetical protein
0.9004

10895

PLN02852
0.8983

267979

HCO3_cotransp superfamily
0.896

6028

NA
0.8956

262287

hypothetical protein
0.8954

9514

hypothetical protein
0.8944

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Asp_Arg_Hydrox superfamily Aspartyl/Asparaginyl beta-hydroxylase; Iron (II)/2-oxoglutarate (2-OG)-dependent oxygenases... - 123.294 4.77E-33 322 - 493 superfamily 266860

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46818 PHATR_46818 178682 157448 419689 Not available Not available 554158

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004597 GO:0018193 GO:0030176 -

GO:0004597

peptide-aspartate beta-dioxygenase activity

Details: 
Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2.
GO Category: 
MF

GO:0018193

peptidyl-amino acid modification

Details: 
The alteration of an amino acid residue in a peptide.
GO Category: 
BP

GO:0030176

integral component of endoplasmic reticulum membrane

Details: 
The component of the endoplasmic reticulum membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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