8215 (Tp_HSF_3.5h) HSF_DNA-bind superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
8215 chr_9 (Tp_HSF_3.5h) HSF_DNA-bind superfamily 1132447 1134302 - HSF_DNA-bind superfamily
NCBI ID Ensembl Genomes exon ID
7446983 Thaps8215.3, Thaps8215.2, Thaps8215.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0442
Normalized Mean Residue
Thaps_bicluster_0043
0.36
(bd1094) FH2 superfamily
0.8669
(bd1092) NA
0.8531
(bd1095) NA
0.8419
(Tp_HSF_2.6e) HSF_DNA-bind superfamily
0.8385
hypothetical protein
0.8331
(bd856) NA
0.8135
hypothetical protein
0.798
SUL1
0.7911
hypothetical protein
0.7908
hypothetical protein
0.7894
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 84.859 5.89E-20 114 - 205 superfamily 264552
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0005634 GO:0006355 GO:0003677 GO:0001584 GO:0007186 GO:0016021 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

G-protein coupled receptor signaling pathway

Details: 
A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription.
GO Category: 
BP

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC
Log in to post comments