8270 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8270	chr_10	ANK	149410	150823	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447010	Thaps8270.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0223

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0069	0.35	3.6 3500

Most Highly Correlated Transcripts

5484 DUF914 0.9194	23534 hypothetical protein 0.912	bd96 (bd96) eIF-3_zeta 0.9077	36321 hypothetical protein 0.9076	30980 EngA2 0.9065	21698 hypothetical protein 0.9065
22965 SrmB 0.9056	268027 Met_10 0.9041	269030 UTP15_C 0.9039	26926 DEXDc superfamily 0.9033

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	64.327	1.35E-12	23 - 145	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	64.327	1.35E-12	23 - 145	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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