1417 GpcrRhopsn4 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1417 chr_1 GpcrRhopsn4 superfamily 1453442 1454995 + GpcrRhopsn4 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451476 Thaps1417.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0240
 0.25

Most Highly Correlated Transcripts

31829

CBS_like
0.9175

9947

hypothetical protein
0.9144

8303

Glyco_trans_1_2
0.9111

3154

(Tp_HSF_1b) HSF_DNA-bind
0.9092

9459

Thioredoxin_like superfamily
0.9058

8524

pntA
0.8988

23616

Peptidase_A22B superfamily
0.8982

5638

hypothetical protein
0.8978

11575

hypothetical protein
0.8962

20664

hypothetical protein
0.8941

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GpcrRhopsn4 superfamily Rhodopsin-like GPCR transmembrane domain; This region of 270 amino acids is the seven transmembrane... - 79.9746 4.48E-17 171 - 458 superfamily 255820

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48191 PHATRDRAFT_48191 274924 212245 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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