8420 UbiH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8420 chr_10 UbiH 543726 545429 + UbiH

Synonyms

NCBI ID Ensembl Genomes exon ID
7445891 Thaps8420.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0155

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0009
 0.42

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9942

bd392

(bd392) DEXDc
0.9369

9910

Peptidase_C19 superfamily
0.9327

34228

Strumpellin superfamily
0.9244

263504

sensory_box
0.921

24562

hypothetical protein
0.9189

262527

pi 4-kinase
0.9168

bd446

(bd446) HrpA
0.9157

263734

LRR_RI superfamily
0.9118

9342

hypothetical protein
0.9105

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme... - 105.173 8.32E-25 66 - 526 multi-dom 223727

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49644 PHATRDRAFT_49644 Not available 305769 97369 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004497 GO:0006725 GO:0006118 GO:0008152 GO:0016491 GO:0004502 -

GO:0004497

monooxygenase activity

Details: 
Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
GO Category: 
MF

GO:0006725

cellular aromatic compound metabolic process

Details: 
The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO Category: 
BP

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004502

kynurenine 3-monooxygenase activity

Details: 
Catalysis of the reaction: L-kynurenine + H(+) + NADPH + O(2) = 3-hydroxy-L-kynurenine + H(2)O + NADP(+).
GO Category: 
MF

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