8972 RWDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8972	chr_12	RWD	198077	199319	-	RWD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449375	Thaps8972.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0147

Most Highly Correlated Transcripts

21459 hypothetical protein 0.8753	4091 hypothetical protein 0.8694	3310 hypothetical protein 0.868	25509 hypothetical protein 0.8631	35745 Peptidase_C13 superfamily 0.863	7945 hypothetical protein 0.8614
1000 hypothetical protein 0.8592	2580 AarF 0.8591	37607 ECM4 0.8582	8415 P4Hc 0.8533

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RWD		RWD domain; This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The...	cl02687	69.2807	1.56E-14	23 - 145	specific	253380
RWD superfamily		RWD domain; This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The...	-	69.2807	1.56E-14	23 - 145	superfamily	261407

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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