9045 TLC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9045 chr_12 TLC superfamily 402798 404880 - TLC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps9045.1, Thaps9045.2, Thaps9045.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0324

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0210
 0.31

Most Highly Correlated Transcripts

24462

(NTT2) hypothetical protein
0.9994

bd1439

(bd1439) ycf35
0.8847

ThpsCp130

(ycf35) Ycf35
0.8847

9384

hypothetical protein
0.8597

5080

hypothetical protein
0.8476

38051

AAA_17 superfamily
0.8411

bd1120

(bd1120) L51_S25_CI-B8
0.8395

bd636

(bd636) L51_S25_CI-B8
0.8331

36650

hypothetical protein
0.8328

22449

hypothetical protein
0.8292

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TLC superfamily TLC ATP/ADP transporter; TLC ATP/ADP transporter. - 414.326 7.96E-138 135 - 617 superfamily 261954

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11615 PHATRDRAFT_11615 193933 240837 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005471 GO:0005524 GO:0006810 GO:0016021 -

GO:0005471

ATP:ADP antiporter activity

Details: 
Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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