bd1120 (bd1120) L51_S25_CI-B8Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1120	bd_3x105	(bd1120) L51_S25_CI-B8	10800	11201	-	L51_S25_CI-B8

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0420

Most Highly Correlated Transcripts

bd636 (bd636) L51_S25_CI-B8 0.9864	4834 PTPS 0.9043	11934 hypothetical protein 0.8985	21801 hypothetical protein 0.8926	11341 AAT_like 0.8831	21532 Ins_P5_2-kin superfamily 0.8802
36108 hypothetical protein 0.8621	31510 TIGR00049 0.8595	bd1472 (bd1472) rpmG 0.8572	41211 rpmG 0.8482

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
L51_S25_CI-B8		Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain; Proteins containing this domain are...	cl04907	65.2327	7.16E-15	21 - 91	specific	197984
L51_S25_CI-B8 superfamily		Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain; The proteins in this family are located...	-	65.2327	7.16E-15	21 - 91	superfamily	198850

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45880	PHATRDRAFT_45880	271824	178055	76013	Cre06.g270650.t1.2	AT3G59650.1	284634

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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