9577 Trypsin_2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9577	chr_13	Trypsin_2	818518	819975	+	Trypsin_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447868	Thaps9577.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0244

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0119	0.42	8.5 8.5

Most Highly Correlated Transcripts

1628 PRK01415 0.8967	2018 HA 0.8762	13308 PLN02948 0.8751	31145 COG4581 0.8694	21801 hypothetical protein 0.8687	261719 AdoMet_MTases superfamily 0.8583
34973 DPPIV_N 0.8576	6642 hypothetical protein 0.8567	plastid_psb28 0.8555	21176 FMO-like 0.8519

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trypsin_2		Trypsin-like peptidase domain; This family includes trypsin like peptidase domains.	cl19303	66.8829	2.64E-13	181 - 359	specific	257693
Trypsin_2 superfamily		Trypsin-like peptidase domain; This family includes trypsin like peptidase domains.	-	66.8829	2.64E-13	181 - 359	superfamily	267656

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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