9908 PRK14902Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9908	chr_14	PRK14902	705976	708030	+	PRK14902

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441799	Thaps9908.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0133

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0048	0.39	71000 7300

Most Highly Correlated Transcripts

25576 Galactosyl_T superfamily 0.9048	2317 Mito_carr 0.9041	10474 hypothetical protein 0.901	10475 hypothetical protein 0.901	6693 hypothetical protein 0.8916	1244 hypothetical protein 0.8865
31052 S_TKc 0.886	7140 Ifi-6-16 0.8849	1871 hypothetical protein 0.8826	5922 hypothetical protein 0.8815

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRK14902		16S rRNA methyltransferase B; Provisional	-	191.158	1.47E-53	291 - 683	multi-dom	237857

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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