ThpsCr004 (rrn5') Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCr004	chloroplast	(rrn5')	122245	122370	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524833	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0069

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0030	0.47	0.00000015 1000

Most Highly Correlated Transcripts

ThpsCr003 (rrn5) 0.9903	bd1350 (bd1350) psaF 0.8999	bd1313 (bd1313) psbH 0.8951	ThpsCp065 (psbE) photosystem II protein V 0.8849	bd1545 (bd1545) psbC 0.8808	ThpsCp064 (psbF) photosystem II protein VI 0.8752
ThpsCp066 (ycf4) photosystem I assembly protein Ycf4 0.8746	ThpsCp073 (psaF) photosystem I subunit III 0.8743	bd2073 (bd2073) psbB 0.874	ThpsCp062 (psbJ) photosystem II protein J 0.8739

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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