bd1339 (bd1339) psaD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1339 bd_26x41 (bd1339) psaD 8559 8978 - psaD

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0069

Most Highly Correlated Transcripts

ThpsCp058

(psaD) photosystem I subunit II
1

ThpsCp048

(petN) cytochrome b6/f complex subunit VIII
0.9517

ThpsCp051

(psbK) photosystem II protein K
0.9469

bd1037

(bd1037) Ycf66_N
0.9435

ThpsCp006

(ycf66) hypothetical protein
0.9435

ThpsCt015

(trnfM(cau))
0.9425

bd2028

(bd2028) NA
0.9415

bd1441

(bd1441) ccsA
0.9391

ThpsCp088

(ccsA) cytochrome c biogenesis protein
0.9391

ThpsCp128

(ccsA) cytochrome c biogenesis protein
0.9391

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
psaD photosystem I subunit II; Validated cl03639 297.826 8.55E-105 1 - 138 specific 177067
PsaD superfamily PsaD; This family consists of PsaD from plants and cyanobacteria. PsaD is an extrinsic polypeptide... - 297.826 8.55E-105 1 - 138 superfamily 243481

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre05.g238332.t1.1 AT1G03130.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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