bd1243 (bd1243) rpl33Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1243	bd_26x41	(bd1243) rpl33	24942	25136	-	rpl33

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0063

Most Highly Correlated Transcripts

ThpsCp036 (rpl33) ribosomal protein L33 1	bd93 (bd93) NA 0.9654	bd1435 (bd1435) ycf3 0.9574	ThpsCp038 (ycf3) photosystem I assembly protein Ycf3 0.9574	bd1013 (bd1013) PRX_Typ2cys 0.9573	ThpsCp023 (ycf42) putative peroxiredoxin ycf42 0.9569
ThpsCp024 (rpl35) ribosomal protein L35 0.9561	ThpsCp025 (rpl20) ribosomal protein L20 0.949	ThpsCp081 (secA) preprotein translocase subunit SecA 0.9331	ThpsCp135 (secA) preprotein translocase subunit SecA 0.9331

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rpl33		ribosomal protein L33	cl00383	103.13	1.58E-30	1 - 64	specific	177033
Ribosomal_L33 superfamily		Ribosomal protein L33; Ribosomal protein L33.	-	103.13	1.58E-30	1 - 64	superfamily	260395

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	210766	Not available	Cre10.g462950.t1.2	ATCG00640.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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