bd997 (bd997) rpoC1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
bd997 bd_26x41 (bd997) rpoC1 30308 32506 + rpoC1
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0063
(rpoC1) RNA polymerase beta' subunit
1
(secA) preprotein translocase subunit SecA
0.9328
(secA) preprotein translocase subunit SecA
0.9328
(bd2063) NA
0.9322
(ycf45) hypothetical protein
0.9322
(bd1267) rpoB
0.9314
(rpoB) RNA polymerase beta subunit
0.9314
(rpl20) ribosomal protein L20
0.9236
(rpl27) ribosomal protein L27
0.9182
(rpl27) ribosomal protein L27
0.9182
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNAP_largest_subunit_N superfamily Largest subunit of RNA polymerase (RNAP), N-terminal domain; This region represents the N-terminal... - 668.07 0 6 - 594 superfamily 267467
RNA_pol_Rpb1_3 superfamily RNA polymerase Rpb1, domain 3; RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 69.5769 9.71E-14 568 - 693 superfamily 252921
RNA_pol_Rpb1_3 superfamily RNA polymerase Rpb1, domain 3; RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 69.5769 9.71E-14 568 - 693 superfamily 252921
rpoC1 RNA polymerase beta' subunit - 870.762 0 2 - 693 multi-dom 214336
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 210799 Not available Not available ATCG00180.1 Not available
KEGG description KEGG Pathway
Not available Not available
Not available -
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