PHATRDRAFT_21535 af228419_1rab6 protein (Rab6)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21535	chr_13	af228419_1rab6 protein (Rab6)	351140	351850	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0182

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0120	0.36	4800 5800

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rab6		Rab GTPase family 6 (Rab6); Rab6 is involved in microtubule-dependent transport pathways through...	cl17170	323.035	9.71E-113	34 - 195	specific	206654
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	323.035	9.71E-113	34 - 195	superfamily	266525

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3582		Not available	224174	301968	436478	Cre01.g047550.t1.2	AT5G10260.1	254677

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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