PHATRDRAFT_3182 hect (homologous to the e6-apcarboxyl terminus) domain and rcc1-like domainpartial (RCC1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_3182 chr_17 hect (homologous to the e6-apcarboxyl terminus) domain and rcc1-like domainpartial (RCC1) 595351 596449 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0388

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0117
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 41.7436 1.62E-05 312 - 341 superfamily 249843

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38047 Not available 259247 264537 365890 Cre05.g230600.t1.1 AT5G12350.1 358246

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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