PHATRDRAFT_47127 atp-dependent dna helicase (KU superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47127	chr_12	atp-dependent dna helicase (KU superfamily)	530518	532180	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0412

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0149	0.22	84 640

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
KU superfamily		Ku-core domain; includes the central DNA-binding beta-barrels, polypeptide rings, and the C-...	-	96.9755	1.51E-22	303 - 500	superfamily	261400
vWFA superfamily		Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von...	-	45.0467	1.40E-05	21 - 152	superfamily	260163

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21220		Not available	240046	64406	Not available	Not available	Not available	316299

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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