PHATRDRAFT_52285 cg1957-isoform a (YSH1)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_52285 chr_14 cg1957-isoform a (YSH1) 776072 779218 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0064
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Beta-Casp Beta-Casp domain; The beta-CASP domain is found C terminal to the beta-lactamase domain in pre-mRNA... cl12567 86.0544 2.16E-19 287 - 404 specific 214983
Beta-Casp superfamily Beta-Casp domain; The beta-CASP domain is found C terminal to the beta-lactamase domain in pre-mRNA... - 86.0544 2.16E-19 287 - 404 superfamily 264703
CPSF100_C superfamily Cleavage and polyadenylation factor 2 C-terminal; This family lies at the C-terminus of many fungal... - 67.6648 5.88E-13 931 - 998 superfamily 257636
YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal... - 137.554 1.53E-34 22 - 405 multi-dom 224157
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264081 Not available 175955 193992 Not available Cre12.g487600.t1.1 AT5G23880.1 552782
KEGG description KEGG Pathway
Not available Not available
Not available -
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