11212 Membrane-FADS-like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11212 chr_19a_19 Membrane-FADS-like superfamily 463858 465405 - Membrane-FADS-like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444323 Thaps11212.2, Thaps11212.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0327

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0157
 0.39

Most Highly Correlated Transcripts

bd686

(bd686) Glyco_transf_22 superfamily
0.7475

21709

hypothetical protein
0.7332

25496

hypothetical protein
0.7224

5794

hypothetical protein
0.715

11172

hypothetical protein
0.708

12899

AAA
0.7049

264188

COG1026
0.7026

7453

SpoU_methylase superfamily
0.6998

22918

hypothetical protein
0.6995

20737

Sun
0.6934

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Membrane-FADS-like superfamily The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane... - 68.8223 1.12E-13 321 - 425 superfamily 260534

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44622 PHATRDRAFT_44622 225029 189846 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016491 -

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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