12859 VacB
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
12859 chr_4 VacB 651487 654945 - VacB
NCBI ID Ensembl Genomes exon ID
7452622 Thaps12859.1, Thaps12859.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0395
E1_like_apg7
0.9251
hypothetical protein
0.9026
PolY superfamily
0.8978
hypothetical protein
0.8948
COG3899
0.8936
hypothetical protein
0.8867
(DGT) PLN03242
0.8864
hypothetical protein
0.883
hypothetical protein
0.8829
hypothetical protein
0.8817
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNB RNB domain; This domain is the catalytic domain of ribonuclease II. cl19762 320.013 1.26E-99 597 - 965 specific 250123
RNB superfamily RNB domain; This domain is the catalytic domain of ribonuclease II. - 320.013 1.26E-99 597 - 965 superfamily 268115
VacB Exoribonuclease R [Transcription] - 354.005 2.65E-107 456 - 1073 multi-dom 223631
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26775 PHATRDRAFT_26775 204984 178610 Not available Cre03.g208100.t1.1 AT1G77680.1 472843
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0004540 GO:0000175 GO:0004534 GO:0016896 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

ribonuclease activity

Details: 
Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.
GO Category: 
MF

3'-5'-exoribonuclease activity

Details: 
Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule.
GO Category: 
MF

5'-3' exoribonuclease activity

Details: 
Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule.
GO Category: 
MF

exoribonuclease activity, producing 5'-phosphomonoesters

Details: 
Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.
GO Category: 
MF
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