17002 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
17002	chr_3	ANK	2309855	2311423	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443826	Thaps17002.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0212

Most Highly Correlated Transcripts

32805 AAA 0.9113	29053 V-ATPase_C superfamily 0.9027	260816 DAGK_acc superfamily 0.8933	13448 Sec1 0.8807	268857 Peptidase_C14 0.8677	3176 hypothetical protein 0.8675
262863 BAR_SNX 0.8674	268761 hypothetical protein 0.8661	1210 hypothetical protein 0.8624	16295 FBPase 0.8604

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	59.7046	6.93E-11	2 - 96	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	59.7046	6.93E-11	2 - 96	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42434	PHATRDRAFT_42434	274316	243525	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005524 GO:0000166 GO:0017111 -

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