Thaps_hclust_0212 Hierarchical Clustering
Thalassiosira pseudonana

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006886 intracellular protein transport 0.000267993 0.964507 Thaps_hclust_0212
GO:0015031 protein transport 0.00203584 1 Thaps_hclust_0212
GO:0007264 small GTPase mediated signal transduction 0.0172933 1 Thaps_hclust_0212
GO:0006207 'de novo' pyrimidine base biosynthesis 0.0296321 1 Thaps_hclust_0212
GO:0051258 protein polymerization 0.0470024 1 Thaps_hclust_0212
GO:0043087 regulation of GTPase activity 0.0584155 1 Thaps_hclust_0212
GO:0006807 nitrogen compound metabolism 0.0640724 1 Thaps_hclust_0212
GO:0016567 protein ubiquitination 0.0805411 1 Thaps_hclust_0212
GO:0016192 vesicle-mediated transport 0.0918683 1 Thaps_hclust_0212
GO:0006520 amino acid metabolism 0.118866 1 Thaps_hclust_0212

Members

997 : PLN02342
9186 : hypothetical protein
23557 : hypothetical protein
33219 : Sdh5
2447 : hypothetical protein
9527 : hypothetical protein
23618 : RING
33780 : UBQ superfamily
2467 : COG5325
10519 : hypothetical protein
25276 : ANK
39847 : (APM2) AP-2_Mu2_Cterm
2985 : hypothetical protein
11133 : hypothetical protein
25338 : hypothetical protein
40586 : (GMD1) PLN02653
3564 : hypothetical protein
11479 : hypothetical protein
25837 : hypothetical protein
261381 : Rab5_related
5622 : hypothetical protein
11945 : hypothetical protein
26136 : MRS6 superfamily
261827 : PDI_a_family
6093 : hypothetical protein
11947 : hypothetical protein
26146 : 14-3-3
262721 : (FHK1) sensory_box
8369 : hypothetical protein
17002 : ANK
28984 : (APS3) APS2
263742 : Synaptobrevin
8675 : DUF4336 superfamily
21239 : Cyt_b561_FRRS1_like
29053 : V-ATPase_C superfamily
264451 : MPN_RPN11_CSN5
9029 : hypothetical protein
22473 : aliphatic_amidase
29237 : (TUB4) PLN00222
268761 : hypothetical protein
9184 : hypothetical protein
23528 : Rab11_like
32805 : AAA

Conditions

Condition Condition Difference FDR
diel_light_vs_dark diel_light_vs_dark 0.886 0.000485
lowFe_KTKB_Day3 lowFe_KTKB_Day3 -0.216 0.163
lowFe_KTKB_Day5 lowFe_KTKB_Day5 -0.040 0.808
BaP BaP 0.194 0.197
exponential_vs_stationary_24highlight exponential_vs_stationary_24highlight 0.001 0.988
co2_elevated_stat_arrays co2_elevated_stat_arrays -0.153 0.475
lowtemp_TMEVA lowtemp_TMEVA 0.025 0.915
highpH_TMEVA highpH_TMEVA 0.132 0.274
co2_elevated_expo_arrays co2_elevated_expo_arrays 0.007 0.987
lowFe_TMEVA lowFe_TMEVA -0.186 0.426
exponential_vs_stationary_24light exponential_vs_stationary_24light 0.126 0.684
lowN_TMEVA lowN_TMEVA -0.026 0.944
diel_exponential_vs_stationary diel_exponential_vs_stationary -0.376 0.000602
lowSi_TMEVA lowSi_TMEVA -0.754 0.00435
highlight_arrays highlight_arrays 0.033 0.805

Motifs

MEME Output