32805 AAAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32805	chr_3	AAA	2313930	2314688	+	AAA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443827	Thaps32805.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0212

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0040	0.39	0.032 0.41

Most Highly Correlated Transcripts

17002 ANK 0.9113	268761 hypothetical protein 0.8801	29053 V-ATPase_C superfamily 0.8766	16295 FBPase 0.8731	261973 PKc_like superfamily 0.8719	262863 BAR_SNX 0.8696
23778 hypothetical protein 0.8643	3176 hypothetical protein 0.8638	20585 RanBD_family 0.8635	7846 hypothetical protein 0.8605

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	60.6227	5.71E-12	12 - 156	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	60.6227	5.71E-12	12 - 156	superfamily	267297

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_4937	PHATRDRAFT_4937	152572	259554	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005524 GO:0000166 GO:0017111 -

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