1704 ArsA_ATPase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1704 chr_1 ArsA_ATPase 2214403 2216468 - ArsA_ATPase

Synonyms

NCBI ID Ensembl Genomes exon ID
7445538 Thaps1704.1, Thaps1704.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0239

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0291
 0.48

Most Highly Correlated Transcripts

19913

ybbN
0.8575

34505

hypothetical protein
0.8485

24990

hypothetical protein
0.8452

269586

hypothetical protein
0.8285

1255

Nic96 superfamily
0.8252

262615

Syja_N
0.8249

262573

G_glu_transpept
0.824

25073

hypothetical protein
0.8179

13427

AarF
0.8166

264481

Gly_transf_sug
0.8165

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven... cl17203 121.199 4.20E-31 104 - 415 specific 238992
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 121.199 4.20E-31 104 - 415 superfamily 266552
GET3_arsA_TRC40 superfamily transport-energizing ATPase, TRC40/GET3/ArsA family; Members of this family are ATPases that... - 67.5032 1.10E-12 500 - 639 superfamily 232932
ArsA_ATPase Anion-transporting ATPase; This Pfam family represents a conserved domain, which is sometimes... - 184.48 9.41E-53 104 - 462 multi-dom 251258

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32803 PHATRDRAFT_32803 157498 325585 224177 Cre05.g245158.t1.1 AT3G10350.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006820 GO:0016020 GO:0015446 GO:0042961 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006820

anion transport

Details: 
The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0015446

arsenite-transmembrane transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out).
GO Category: 
MF

GO:0042961

antimonite-transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + antimonite(in) = ADP + phosphate + antimonite(out).
GO Category: 
MF

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