264481 Gly_transf_sugThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264481	chr_18	Gly_transf_sug	25161	26231	+	Gly_transf_sug

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450920	Thaps264481.2, Thaps264481.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0236

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0064	0.41	0.00087 7.6

Most Highly Correlated Transcripts

261357 NAD_binding_8 superfamily 0.881	bd898 (bd898) NA 0.8746	2519 hypothetical protein 0.8551	35690 CysH 0.8508	263610 COG3899 0.8493	263118 ABC_ATPase superfamily 0.8476
7136 Glo_EDI_BRP_like_2 0.8265	262615 Syja_N 0.8236	38991 COG1565 0.8174	13909 EHD 0.8171

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Gly_transf_sug		Glycosyltransferase sugar-binding region containing DXD motif; The DXD motif is a short conserved...	cl19952	80.0635	5.81E-19	103 - 178	specific	252625
Gly_transf_sug superfamily		Glycosyltransferase sugar-binding region containing DXD motif; The DXD motif is a short conserved...	-	80.0635	5.81E-19	103 - 178	superfamily	268305

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre12.g522650.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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