17095 NIF
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17095 chr_4 NIF 1061723 1063207 - NIF

Synonyms

NCBI ID Ensembl Genomes exon ID
7447951 Thaps17095.2, Thaps17095.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0442

Most Highly Correlated Transcripts

12899

AAA
0.913

13448

Sec1
0.9017

7978

Cation_efflux superfamily
0.8923

263135

VATPase_H superfamily
0.8847

7707

hypothetical protein
0.883

38111

Mito_carr
0.8825

31598

cyclophilin superfamily
0.8779

9036

hypothetical protein
0.8761

1063

hypothetical protein
0.8717

4105

PKc_like superfamily
0.8716

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NIF NLI interacting factor-like phosphatase; This family contains a number of NLI interacting factor... cl17354 223.675 9.11E-71 274 - 434 specific 251684
NIF superfamily NLI interacting factor-like phosphatase; This family contains a number of NLI interacting factor... - 223.675 9.11E-71 274 - 434 superfamily 266644
FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] - 186.127 9.39E-54 257 - 434 multi-dom 227517

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8658 PHATRDRAFT_8658 199931 215137 Not available Cre06.g284450.t1.2 Not available 296510

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000158 GO:0004721 GO:0004723 GO:0004724 GO:0005963 GO:0008420 GO:0008597 GO:0015071 GO:0017018 GO:0017020 GO:0017023 GO:0030357 -

GO:0000158

NA

Details: 
NA
GO Category: 
NA

GO:0004721

phosphoprotein phosphatase activity

Details: 
Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
GO Category: 
MF

GO:0004723

calcium-dependent protein serine/threonine phosphatase activity

Details: 
Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.
GO Category: 
MF

GO:0004724

magnesium-dependent protein serine/threonine phosphatase activity

Details: 
Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of magnesium.
GO Category: 
MF

GO:0005963

magnesium-dependent protein serine/threonine phosphatase complex

Details: 
An enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.
GO Category: 
CC

GO:0008420

CTD phosphatase activity

Details: 
Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate.
GO Category: 
MF

GO:0008597

calcium-dependent protein serine/threonine phosphatase regulator activity

Details: 
Modulation of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.
GO Category: 
MF

GO:0015071

NA

Details: 
NA
GO Category: 
NA

GO:0017018

myosin phosphatase activity

Details: 
Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate.
GO Category: 
MF

GO:0017020

myosin phosphatase regulator activity

Details: 
Modulation of the activity of the enzyme myosin phosphatase.
GO Category: 
MF

GO:0017023

myosin phosphatase complex

Details: 
An enzyme complex that catalyzes the removal of the phosphate group from phosphomyosin.
GO Category: 
CC

GO:0030357

NA

Details: 
NA
GO Category: 
NA

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