20602 Ribosomal_L22 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
20602 chr_1 Ribosomal_L22 superfamily 276429 277754 + Ribosomal_L22 superfamily
NCBI ID Ensembl Genomes exon ID
7452523 Thaps20602.2, Thaps20602.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0288
Aldolase_II superfamily
0.9074
FBPase
0.9023
(KE4) Zip
0.8957
SAICAR_synt_Sc
0.8937
DUF3611 superfamily
0.8933
Ribosomal_S15p_S13e
0.8881
hypothetical protein
0.8879
AAA
0.8873
hypothetical protein
0.8826
(bd997) rpoC1
0.8815
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L22 superfamily Ribosomal protein L22/L17e. L22 (L17 in eukaryotes) is a core protein of the large ribosomal... - 67.6705 2.04E-14 129 - 230 superfamily 260357
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8024 PHATRDRAFT_8024 198293 149140 Not available Not available Not available 401882
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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