21141 RibD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21141 chr_2 RibD 325829 327057 + RibD

Synonyms

NCBI ID Ensembl Genomes exon ID
7448629 Thaps21141.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0204

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0194
 0.41

Most Highly Correlated Transcripts

38294

CBS_like
0.8837

24714

hypothetical protein
0.8696

34810

Calreticulin
0.855

25076

S1_like superfamily
0.8543

9388

hypothetical protein
0.8536

33104

LDH_like_2
0.8525

35401

COG0523
0.8494

262610

ADPRase_NUDT5
0.8462

13448

Sec1
0.8458

16295

FBPase
0.8422

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RibD Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism] cl17279 114.331 8.73E-30 122 - 347 specific 224896
RibD_C superfamily RibD C-terminal domain; The function of this domain is not known, but it is thought to be involved... - 114.331 8.73E-30 122 - 347 superfamily 266607

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44690 PHATRDRAFT_44690 258999 182808 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008703 GO:0009231 -

GO:0008703

5-amino-6-(5-phosphoribosylamino)uracil reductase activity

Details: 
Catalysis of the reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP(+) = 5-amino-6-(5-phosphoribosylamino)uracil + H(+) + NADPH.
GO Category: 
MF

GO:0009231

riboflavin biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).
GO Category: 
BP

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