21238 (ALD3) ALDH_F3-13-14_CALDH-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21238 chr_2 (ALD3) ALDH_F3-13-14_CALDH-like 804912 806441 + ALDH_F3-13-14_CALDH-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7450222 Thaps21238.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0408

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0126
 0.34

Most Highly Correlated Transcripts

20868

hypothetical protein
0.8966

1941

hypothetical protein
0.8964

21308

RING
0.8898

1275

hypothetical protein
0.884

885

DUF544 superfamily
0.8819

9364

hypothetical protein
0.8817

3260

hypothetical protein
0.881

261844

PLN02270
0.8804

2906

hypothetical protein
0.8757

10935

Ion_trans
0.8749

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related... cl11961 648.047 0 9 - 440 specific 143406
ALDH-SF superfamily NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-... - 648.047 0 9 - 440 superfamily 264488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16540 PHATRDRAFT_16540 Not available Not available 361274 Not available AT1G44170.2 352984

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016491 GO:0004029 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004029

aldehyde dehydrogenase (NAD) activity

Details: 
Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+.
GO Category: 
MF

Add comment

Log in to post comments