21364 Peptidase_C19 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21364 chr_2 Peptidase_C19 superfamily 1451340 1456767 + Peptidase_C19 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0415

Most Highly Correlated Transcripts

6608

CAP10 superfamily
0.9136

21220

KU superfamily
0.9066

25288

Sec6 superfamily
0.9035

24682

hypothetical protein
0.8971

25270

hypothetical protein
0.8962

5869

hypothetical protein
0.8954

22023

TDT superfamily
0.892

24530

hypothetical protein
0.8913

9677

hypothetical protein
0.8895

268232

COG3899
0.8887

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 202.988 4.46E-57 614 - 965 superfamily 261337
UCH Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase. - 167.97 2.84E-45 612 - 965 multi-dom 249862

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44745 PHATRDRAFT_44745 269813 306147 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0004221 GO:0006511 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0004221

ubiquitin thiolesterase activity

Details: 
Catalysis of the reaction: ubiquitin C-terminal thioester + H2O = ubiquitin + a thiol.
GO Category: 
MF

GO:0006511

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

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