22433 GBP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22433 chr_4 GBP superfamily 1959002 1961187 + GBP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452124 Thaps22433.2, Thaps22433.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0402

Most Highly Correlated Transcripts

7669

hypothetical protein
0.8965

8812

hypothetical protein
0.8727

21405

hypothetical protein
0.8725

24281

hypothetical protein
0.8692

16114

PLN02350
0.865

11307

ABC_ATPase superfamily
0.8566

23903

hypothetical protein
0.8531

6316

hypothetical protein
0.8526

9571

(Tp_HSF_3.2i) HSF_DNA-bind
0.8453

1173

(Tp_HSF_2.7f) regulator [Rayko]
0.8443

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GBP superfamily Guanylate-binding protein, N-terminal domain; Transcription of the anti-viral guanylate-binding... - 166.019 9.76E-47 103 - 404 superfamily 267649

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54726 PHATRDRAFT_54726 230218 236703 Not available Cre08.g384200.t1.2 Not available 558392

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003924 GO:0005525 GO:0006955 -

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0006955

immune response

Details: 
Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
GO Category: 
BP

Add comment

Log in to post comments