9571 (Tp_HSF_3.2i) HSF_DNA-bind
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
9571 chr_13 (Tp_HSF_3.2i) HSF_DNA-bind 803046 804738 - HSF_DNA-bind
NCBI ID Ensembl Genomes exon ID
7450501 Thaps9571.1, Thaps9571.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474
Normalized Mean Residue
Thaps_bicluster_0095
0.37
hypothetical protein
0.8982
hypothetical protein
0.8905
hypothetical protein
0.8887
RPE65 superfamily
0.8774
KU superfamily
0.8765
hypothetical protein
0.8712
hypothetical protein
0.8675
(Tp_Myb2R2) regulator [Rayko]
0.8584
PseudoU_synth_RluCD_like
0.8583
0.8578
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind HSF-type DNA-binding; HSF-type DNA-binding. cl12113 97.1854 2.57E-24 111 - 202 specific 249865
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 97.1854 2.57E-24 111 - 202 superfamily 264552
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF
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