22713 Bac_surface_Ag superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22713	chr_5	Bac_surface_Ag superfamily	1058223	1060294	-	Bac_surface_Ag superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450044	Thaps22713.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0068

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0024	0.39

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9152	bd446 (bd446) HrpA 0.8789	bd392 (bd392) DEXDc 0.8721	36007 Aldolase_II superfamily 0.8669	264556 FBPase 0.8654	bd1777 (bd1777) NA 0.8408
20656 SLC5-6-like_sbd superfamily 0.8396	11996 COG1524 0.8391	16295 FBPase 0.8384	23074 hypothetical protein 0.8379

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Bac_surface_Ag superfamily		Surface antigen; This entry includes the following surface antigens; D15 antigen from H.influenzae...	-	76.3015	2.24E-15	383 - 671	superfamily	250364

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22792	PHATRDRAFT_39419	PHATRDRAFT_39419	182123	237487	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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