20656 SLC5-6-like_sbd superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20656 chr_1 SLC5-6-like_sbd superfamily 622047 625039 - SLC5-6-like_sbd superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453427 Thaps20656.1, Thaps20656.3, Thaps20656.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0068

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.8858

bd624

(bd624) Glyco_transf_34 superfamily
0.8775

37497

cysE
0.871

bd1620

(bd1620) ThiG
0.8679

bd446

(bd446) HrpA
0.8676

4295

hypothetical protein
0.8654

9636

hypothetical protein
0.8559

5942

MinD
0.8551

261278

GRX_GRXh_1_2_like
0.8495

269925

AAA_12 superfamily
0.848

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SLC5-6-like_sbd superfamily Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the solute-... - 154.276 8.76E-41 57 - 470 superfamily 260433

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50012 PHATRDRAFT_50012 157110 254402 236819 Cre17.g721450.t1.1 Not available 332209

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016020 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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